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John A Tainer Selected Research

Enzymes

1/2021Direct interaction of DNA repair protein tyrosyl DNA phosphodiesterase 1 and the DNA ligase III catalytic domain is regulated by phosphorylation of its flexible N-terminus.
1/2021A collagen glucosyltransferase drives lung adenocarcinoma progression in mice.
12/2020Envisioning how the prototypic molecular machine TFIIH functions in transcription initiation and DNA repair.
1/2019RNA Modifications: Reversal Mechanisms and Cancer.
1/2017Phosphate steering by Flap Endonuclease 1 promotes 5'-flap specificity and incision to prevent genome instability.
7/2014The cutting edges in DNA repair, licensing, and fidelity: DNA and RNA repair nucleases sculpt DNA to measure twice, cut once.
4/2010Substrate recognition and catalysis by flap endonucleases and related enzymes.
4/2009Contribution of human manganese superoxide dismutase tyrosine 34 to structure and catalysis.
4/2007The intricate structural chemistry of base excision repair machinery: implications for DNA damage recognition, removal, and repair.

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John A Tainer Research Topics

Disease

56Neoplasms (Cancer)
05/2024 - 07/2003
19Genomic Instability
01/2023 - 11/2004
7Infections
01/2024 - 07/2003
6Breast Neoplasms (Breast Cancer)
05/2024 - 09/2003
5Carcinogenesis
01/2021 - 07/2008
5Ataxia Telangiectasia (Louis Bar Syndrome)
04/2011 - 08/2007
4Amyotrophic Lateral Sclerosis (Lou Gehrig's Disease)
02/2009 - 11/2002
3Bites and Stings (Sting)
04/2024 - 01/2021
3Xeroderma Pigmentosum (Kaposi's Disease)
01/2022 - 01/2019
3Neoplasm Metastasis (Metastasis)
01/2021 - 01/2018
3Nijmegen Breakage Syndrome
01/2018 - 08/2007
3Werner Syndrome (Werner's Syndrome)
06/2011 - 05/2006
3Neurodegenerative Diseases (Neurodegenerative Disease)
04/2009 - 09/2003
3Dehydration (Water Stress)
03/2006 - 10/2003
2Trichothiodystrophy Syndromes
01/2023 - 01/2019
2Mitochondrial Diseases (Mitochondrial Disease)
10/2019 - 02/2009
2Cockayne Syndrome (Syndrome, Cockayne)
01/2019 - 10/2005
2Inflammation (Inflammations)
04/2016 - 11/2008
2Virus Diseases (Viral Diseases)
06/2012 - 01/2011
2Premature Aging
06/2011 - 05/2006
1Pancreatic Neoplasms (Pancreatic Cancer)
04/2024
1Human Influenza (Influenza)
01/2024
1Hypoxia (Hypoxemia)
01/2022
1Hyperthermia
01/2022
1Adenocarcinoma of Lung
01/2021
1Autism Spectrum Disorder
01/2021
1Autistic Disorder (Autism)
01/2021
1COVID-19
01/2021

Drug/Important Bio-Agent (IBA)

30DNA (Deoxyribonucleic Acid)IBA
04/2024 - 11/2004
23Proteins (Proteins, Gene)FDA Link
01/2022 - 09/2003
10Phosphotransferases (Kinase)IBA
04/2024 - 08/2007
9EnzymesIBA
01/2021 - 04/2007
61,2- di- (4- sulfamidophenyl)- 4- butylpyrazolidine- 3,5- dione (DSB)IBA
08/2021 - 10/2009
5UbiquitinIBA
04/2016 - 09/2007
5Superoxide DismutaseIBA
04/2009 - 11/2002
4RNA (Ribonucleic Acid)IBA
05/2024 - 01/2011
4Poly(ADP-ribose) Polymerase InhibitorsIBA
03/2024 - 12/2019
4Ligases (Synthetase)IBA
11/2021 - 09/2007
4Flap EndonucleasesIBA
01/2017 - 04/2010
3Adenosine Triphosphatases (ATPase)IBA
10/2023 - 04/2011
3Adenosine Triphosphate (ATP)IBA
01/2023 - 04/2011
3A-Form DNA (A-DNA)IBA
03/2022 - 05/2014
3B-Form DNA (B-DNA)IBA
01/2022 - 01/2016
3Anti-Bacterial Agents (Antibiotics)IBA
01/2021 - 12/2015
3lysyl- arginyl- alanyl- lysyl- alanyl- lysyl- threonyl- threonyl- lysyl- lysyl- arginine (PKCS)IBA
01/2021 - 12/2010
3EndonucleasesIBA
01/2020 - 04/2010
3Superoxide Dismutase-1IBA
10/2014 - 11/2002
3Alkyl and Aryl TransferasesIBA
11/2010 - 08/2007
2Immune Checkpoint InhibitorsIBA
04/2024 - 01/2021
2Peptides (Polypeptides)IBA
04/2024 - 03/2006
2InterferonsIBA
04/2024 - 01/2021
2CytokinesIBA
03/2024 - 01/2021
2Novobiocin (Streptonivicin)FDA Link
10/2023 - 01/2021
2Reactive Oxygen Species (Oxygen Radicals)IBA
01/2022 - 04/2009
2Oxygen (Dioxygen)IBA
11/2021 - 10/2003
2ChromatinIBA
11/2021 - 01/2020
2poly ADP-ribose glycohydrolaseIBA
01/2021 - 12/2019
2CollagenIBA
01/2021 - 01/2018
2PhosphopeptidesIBA
01/2018 - 08/2007
2Phosphates (Orthophosphate)IBA
01/2017 - 01/2017
2CopperIBA
10/2014 - 11/2007
2Cysteine (L-Cysteine)FDA Link
11/2010 - 06/2009
2Exonucleases (3' 5' Exonuclease)IBA
08/2010 - 05/2006
2O(6)-Methylguanine-DNA MethyltransferaseIBA
06/2009 - 08/2007
1Phosphoric Diester Hydrolases (Phosphodiesterases)IBA
05/2024
1cyclic guanosine monophosphate-adenosine monophosphateIBA
04/2024
1Mitochondrial DNA (mtDNA)IBA
04/2024
1Toll-Like Receptor 9IBA
04/2024
1nardilysinIBA
04/2024
1Antiviral Agents (Antivirals)IBA
01/2024
1lariat debranching enzymeIBA
01/2023
1Rad51 RecombinaseIBA
01/2023
1CamptothecinIBA
03/2022
12- cyclohexylidenhydrazo- 4- phenyl- thiazoleIBA
03/2022
1Type I DNA Topoisomerases (Topoisomerase I)IBA
03/2022
1Replication Protein AIBA
01/2022
1Staphylococcal Protein A (Protein A)IBA
01/2022
1Protein Tyrosine PhosphatasesIBA
01/2022
1Vitamin EFDA LinkGeneric
01/2022
1Biomarkers (Surrogate Marker)IBA
08/2021
1Cisplatin (Platino)FDA LinkGeneric
01/2021
1Protein Kinases (Protein Kinase)IBA
01/2021
12-Oxoglutarate 5-Dioxygenase Procollagen-Lysine (Lysyl Hydroxylase)IBA
01/2021
1Adenosine Diphosphate Ribose (ADP-Ribose)IBA
01/2021
1Pemetrexed (MTA)FDA Link
01/2021
1DNA-Activated Protein KinaseIBA
01/2021
1VaccinesIBA
01/2021
1Floxuridine (FUdR)FDA LinkGeneric
01/2021
1Fluorouracil (Carac)FDA LinkGeneric
01/2021
1UracilIBA
01/2021
1UDP glucose-collagen glucosyltransferase (procollagen glucosyltransferase)IBA
01/2021
1Glycoside Hydrolases (Endoglycosidases)IBA
01/2021
1HeterochromatinIBA
01/2021
1high density lipoprotein binding proteinIBA
01/2021
1T-Cell Antigen Receptors (T-Cell Receptor)IBA
01/2021

Therapy/Procedure

9Therapeutics
05/2024 - 07/2006
7Drug Therapy (Chemotherapy)
01/2021 - 08/2004
2Ligation
03/2022 - 08/2015
2Immunotherapy
01/2022 - 01/2021
1Traction
01/2022